The church began in 1902 as the Presbyterian-Methodist Church of Dixie through an agreement between the minister, Mr. Ziegler, and Mr. Ivey, who donated land on North Road for the church. In 1904, the Red River Presbytery organized it as the Dixie Presbyterian Church. In 1934, the congregation purchased from the Caddo Parish School Board a two-story brick school building in Dixie that had been built in 1913 and renovated the first floor for church services. In 1964, a tornado destroyed the building's entire roof, and it was restored as a one-story building. In 1996, the Dixie congregation merged with Belcher Presbyterian Church to form Belcher-Dixie Presbyterian Church, and the Dixie building was purchased by Ebenezer Baptist Church, its current owners.